WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BL.5c.1 Sequence Name  Y73B6BL.5c.1
Length (nt)  1176   Chromosome Location  IV: 6331534-6333344
Chromosome . Primary Identifier  IV Chromosome Location . Start  6331534
Chromosome Location . End  6333344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004783 seu-1 Y73B6BL.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BL.5c Y73B6BL.5c 1176   IV: 6331534-6331946

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.5c.1 6331534 6333344 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126585   413   IV: 6331534-6331946 Caenorhabditis elegans
Exon126589   248   IV: 6331995-6332242 Caenorhabditis elegans
Exon126594   180   IV: 6332418-6332597 Caenorhabditis elegans
Exon126599   263   IV: 6332946-6333208 Caenorhabditis elegans
Exon126601   72   IV: 6333273-6333344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.5c.1 6331534 6333344 1

1 Sequence

Length
1176

1 Sequence Ontology Term

Identifier Name Description
transcript