WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BL.33a.1 Sequence Name  Y73B6BL.33a.1
Length (nt)  2297   Chromosome Location  IV: 6373134-6376523
Chromosome . Primary Identifier  IV Chromosome Location . Start  6373134
Chromosome Location . End  6376523 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.33a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022253 hrpf-2 Y73B6BL.33 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BL.33a Y73B6BL.33a 1833   IV: 6373597-6374257

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.33a.1 6373134 6376523 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126744   1124   IV: 6373134-6374257 Caenorhabditis elegans
Exon126746   194   IV: 6374308-6374501 Caenorhabditis elegans
Exon126749   233   IV: 6374550-6374782 Caenorhabditis elegans
Exon126750   65   IV: 6375457-6375521 Caenorhabditis elegans
Exon126751   145   IV: 6375619-6375763 Caenorhabditis elegans
Exon126752   138   IV: 6375892-6376029 Caenorhabditis elegans
Exon126753   294   IV: 6376082-6376375 Caenorhabditis elegans
Exon126754   104   IV: 6376420-6376523 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.33a.1 6373134 6376523 -1

1 Sequence

Length
2297

1 Sequence Ontology Term

Identifier Name Description
transcript