WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y73B6BL.33a Sequence Name  Y73B6BL.33a
Length (nt)  1833   Chromosome Location  IV: 6373597-6374257
Chromosome . Primary Identifier  IV Chromosome Location . Start  6373597
Chromosome Location . End  6374257
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.33a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30324 HRPF-2, isoform a 66.7 610 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00058335
WBRNAi00001671

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y73B6BL.33a 6373597 6374257 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022253 hrpf-2 Y73B6BL.33 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y73B6BL.33a 6373597 6374257 -1
CDS:Y73B6BL.33a 6374308 6374501 -1
CDS:Y73B6BL.33a 6374550 6374782 -1
CDS:Y73B6BL.33a 6375457 6375521 -1
CDS:Y73B6BL.33a 6375619 6375763 -1
CDS:Y73B6BL.33a 6375892 6376029 -1
CDS:Y73B6BL.33a 6376082 6376375 -1
CDS:Y73B6BL.33a 6376420 6376522 -1

1 Sequence

Length
1833

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y73B6BL.33a.1 Y73B6BL.33a.1 2297   IV: 6373134-6376523