WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BL.38.1 Sequence Name  Y73B6BL.38.1
Length (nt)  1729   Chromosome Location  IV: 6421585-6423497
Chromosome . Primary Identifier  IV Chromosome Location . Start  6421585
Chromosome Location . End  6423497 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BL.38.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022257 puf-11 Y73B6BL.38 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BL.38 Y73B6BL.38 1518   IV: 6421608-6421945

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.38.1 6421585 6423497 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon126886   361   IV: 6421585-6421945 Caenorhabditis elegans
Exon126887   810   IV: 6422083-6422892 Caenorhabditis elegans
Exon126888   558   IV: 6422940-6423497 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BL.38.1 6421585 6423497 1

1 Sequence

Length
1729

1 Sequence Ontology Term

Identifier Name Description
transcript