WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BR.1a.1 Sequence Name  Y73B6BR.1a.1
Length (nt)  1745   Chromosome Location  IV: 6506726-6511045
Chromosome . Primary Identifier  IV Chromosome Location . Start  6506726
Chromosome Location . End  6511045 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BR.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004169 pqn-89 Y73B6BR.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BR.1a Y73B6BR.1a 1446   IV: 6506727-6506915

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BR.1a.1 6506726 6511045 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127162   190   IV: 6506726-6506915 Caenorhabditis elegans
Exon127164   153   IV: 6507016-6507168 Caenorhabditis elegans
Exon127169   176   IV: 6507630-6507805 Caenorhabditis elegans
Exon127172   118   IV: 6507998-6508115 Caenorhabditis elegans
Exon127174   188   IV: 6508216-6508403 Caenorhabditis elegans
Exon127182   247   IV: 6508851-6509097 Caenorhabditis elegans
Exon127187   104   IV: 6509663-6509766 Caenorhabditis elegans
Exon127189   164   IV: 6509838-6510001 Caenorhabditis elegans
Exon127195   405   IV: 6510641-6511045 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BR.1a.1 6506726 6511045 1

1 Sequence

Length
1745

1 Sequence Ontology Term

Identifier Name Description
transcript