WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6BR.1b.1 Sequence Name  Y73B6BR.1b.1
Length (nt)  1930   Chromosome Location  IV: 6506724-6511113
Chromosome . Primary Identifier  IV Chromosome Location . Start  6506724
Chromosome Location . End  6511113 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6BR.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004169 pqn-89 Y73B6BR.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6BR.1b Y73B6BR.1b 1365   IV: 6506727-6506915

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BR.1b.1 6506724 6511113 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127216   192   IV: 6506724-6506915 Caenorhabditis elegans
Exon127220   153   IV: 6507016-6507168 Caenorhabditis elegans
Exon127225   176   IV: 6507630-6507805 Caenorhabditis elegans
Exon127228   118   IV: 6507998-6508115 Caenorhabditis elegans
Exon127230   188   IV: 6508216-6508403 Caenorhabditis elegans
Exon127238   247   IV: 6508851-6509097 Caenorhabditis elegans
Exon127243   104   IV: 6509663-6509766 Caenorhabditis elegans
Exon127245   164   IV: 6509838-6510001 Caenorhabditis elegans
Exon127248   115   IV: 6510224-6510338 Caenorhabditis elegans
Exon127251   473   IV: 6510641-6511113 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6BR.1b.1 6506724 6511113 1

1 Sequence

Length
1930

1 Sequence Ontology Term

Identifier Name Description
transcript