WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G5.5.1 Sequence Name  C01G5.5.1
Length (nt)  1010   Chromosome Location  IV: 6524610-6526524
Chromosome . Primary Identifier  IV Chromosome Location . Start  6524610
Chromosome Location . End  6526524 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015307 C01G5.5 C01G5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G5.5 C01G5.5 864   IV: 6524640-6524711

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G5.5.1 6524610 6526524 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127224   102   IV: 6524610-6524711 Caenorhabditis elegans
Exon127225   99   IV: 6524765-6524863 Caenorhabditis elegans
Exon127226   134   IV: 6525310-6525443 Caenorhabditis elegans
Exon127227   113   IV: 6525492-6525604 Caenorhabditis elegans
Exon127228   170   IV: 6525661-6525830 Caenorhabditis elegans
Exon127229   90   IV: 6525874-6525963 Caenorhabditis elegans
Exon127230   87   IV: 6526010-6526096 Caenorhabditis elegans
Exon127231   215   IV: 6526310-6526524 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G5.5.1 6524610 6526524 1

1 Sequence

Length
1010

1 Sequence Ontology Term

Identifier Name Description
transcript