WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C01G5.4a Sequence Name  C01G5.4a
Length (nt)  3240   Chromosome Location  IV: 6531843-6531870
Chromosome . Primary Identifier  IV Chromosome Location . Start  6531843
Chromosome Location . End  6531870
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G5.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23512 C01G5.4, isoform a 118.9 1079 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00039344
WBRNAi00009946
WBRNAi00028297

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C01G5.4a 6531843 6531870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015306 C01G5.4 C01G5.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C01G5.4a 6531843 6531870 1
CDS:C01G5.4a 6531926 6531988 1
CDS:C01G5.4a 6532040 6532171 1
CDS:C01G5.4a 6532219 6532317 1
CDS:C01G5.4a 6532366 6532473 1
CDS:C01G5.4a 6532703 6535052 1
CDS:C01G5.4a 6535107 6535493 1
CDS:C01G5.4a 6535543 6535615 1

1 Sequence

Length
3240

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C01G5.4a.1 C01G5.4a.1 3397   IV: 6531750-6535679