WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43G2.4.1 Sequence Name  C43G2.4.1
Length (nt)  1482   Chromosome Location  IV: 6560736-6565268
Chromosome . Primary Identifier  IV Chromosome Location . Start  6560736
Chromosome Location . End  6565268 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43G2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016613 best-9 C43G2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43G2.4 C43G2.4 1200   IV: 6562698-6562749

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43G2.4.1 6560736 6565268 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127348   151   IV: 6560736-6560886 Caenorhabditis elegans
Exon127353   54   IV: 6562696-6562749 Caenorhabditis elegans
Exon127355   121   IV: 6562794-6562914 Caenorhabditis elegans
Exon127358   99   IV: 6562963-6563061 Caenorhabditis elegans
Exon127361   138   IV: 6563360-6563497 Caenorhabditis elegans
Exon127364   106   IV: 6563542-6563647 Caenorhabditis elegans
Exon127368   192   IV: 6563768-6563959 Caenorhabditis elegans
Exon127371   144   IV: 6564227-6564370 Caenorhabditis elegans
Exon127376   124   IV: 6564532-6564655 Caenorhabditis elegans
Exon127379   353   IV: 6564916-6565268 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43G2.4.1 6560736 6565268 1

1 Sequence

Length
1482

1 Sequence Ontology Term

Identifier Name Description
transcript