WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43G2.4.3 Sequence Name  C43G2.4.3
Length (nt)  1339   Chromosome Location  IV: 6562690-6565270
Chromosome . Primary Identifier  IV Chromosome Location . Start  6562690
Chromosome Location . End  6565270 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43G2.4.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016613 best-9 C43G2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43G2.4 C43G2.4 1200   IV: 6562698-6562749

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43G2.4.3 6562690 6565270 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127352   60   IV: 6562690-6562749 Caenorhabditis elegans
Exon127357   121   IV: 6562794-6562914 Caenorhabditis elegans
Exon127360   99   IV: 6562963-6563061 Caenorhabditis elegans
Exon127363   138   IV: 6563360-6563497 Caenorhabditis elegans
Exon127366   106   IV: 6563542-6563647 Caenorhabditis elegans
Exon127370   192   IV: 6563768-6563959 Caenorhabditis elegans
Exon127373   144   IV: 6564227-6564370 Caenorhabditis elegans
Exon127378   124   IV: 6564532-6564655 Caenorhabditis elegans
Exon127381   355   IV: 6564916-6565270 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43G2.4.3 6562690 6565270 1

1 Sequence

Length
1339

1 Sequence Ontology Term

Identifier Name Description
transcript