WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C43G2.5a Sequence Name  C43G2.5a
Length (nt)  942   Chromosome Location  IV: 6557230-6557366
Chromosome . Primary Identifier  IV Chromosome Location . Start  6557230
Chromosome Location . End  6557366
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43G2.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34751 TRY-3, isoform a 34.4 313 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00042398
WBRNAi00011893
WBRNAi00090992
WBRNAi00089008

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C43G2.5a 6557230 6557366 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006621 try-3 C43G2.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C43G2.5a 6557230 6557366 1
CDS:C43G2.5a 6557418 6557531 1
CDS:C43G2.5a 6558032 6558167 1
CDS:C43G2.5a 6558500 6558620 1
CDS:C43G2.5a 6558861 6559030 1
CDS:C43G2.5a 6559224 6559341 1
CDS:C43G2.5a 6560736 6560881 1

1 Sequence

Length
942

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C43G2.5a.1 C43G2.5a.1 1091   IV: 6557155-6560955