WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43G2.3a.1 Sequence Name  C43G2.3a.1
Length (nt)  700   Chromosome Location  IV: 6578214-6579402
Chromosome . Primary Identifier  IV Chromosome Location . Start  6578214
Chromosome Location . End  6579402 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43G2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016612 C43G2.3 C43G2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43G2.3a C43G2.3a 633   IV: 6578239-6578241

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43G2.3a.1 6578214 6579402 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127419   28   IV: 6578214-6578241 Caenorhabditis elegans
Exon127420   201   IV: 6578289-6578489 Caenorhabditis elegans
Exon127421   72   IV: 6578538-6578609 Caenorhabditis elegans
Exon127422   209   IV: 6578957-6579165 Caenorhabditis elegans
Exon127425   190   IV: 6579213-6579402 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43G2.3a.1 6578214 6579402 1

1 Sequence

Length
700

1 Sequence Ontology Term

Identifier Name Description
transcript