WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38A5.12.1 Sequence Name  F38A5.12.1
Length (nt)  334   Chromosome Location  IV: 6591696-6592080
Chromosome . Primary Identifier  IV Chromosome Location . Start  6591696
Chromosome Location . End  6592080 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A5.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018169 nspb-2 F38A5.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A5.12 F38A5.12 249   IV: 6591719-6591913

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38A5.12.1 6591696 6592080 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127488   218   IV: 6591696-6591913 Caenorhabditis elegans
Exon127489   116   IV: 6591965-6592080 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38A5.12.1 6591696 6592080 1

1 Sequence

Length
334

1 Sequence Ontology Term

Identifier Name Description
transcript