WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F38A5.11 Sequence Name  F38A5.11
Length (nt)  1002   Chromosome Location  IV: 6592689-6592833
Chromosome . Primary Identifier  IV Chromosome Location . Start  6592689
Chromosome Location . End  6592833
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A5.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41649 IRLD-7 39.1 333 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00046669
WBRNAi00014525

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F38A5.11 6592689 6592833 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018168 irld-7 F38A5.11 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F38A5.11 6592689 6592833 1
CDS:F38A5.11 6592880 6592954 1
CDS:F38A5.11 6593001 6593110 1
CDS:F38A5.11 6593549 6593755 1
CDS:F38A5.11 6593800 6593920 1
CDS:F38A5.11 6593966 6594084 1
CDS:F38A5.11 6594126 6594193 1
CDS:F38A5.11 6594274 6594304 1
CDS:F38A5.11 6594351 6594476 1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F38A5.11.1 F38A5.11.1 1143   IV: 6590360-6594529