WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38A5.5.1 Sequence Name  F38A5.5.1
Length (nt)  368   Chromosome Location  IV: 6594553-6594971
Chromosome . Primary Identifier  IV Chromosome Location . Start  6594553
Chromosome Location . End  6594971 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018162 nspb-3 F38A5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A5.5 F38A5.5 249   IV: 6594655-6594708

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38A5.5.1 6594553 6594971 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127500   156   IV: 6594553-6594708 Caenorhabditis elegans
Exon127501   212   IV: 6594760-6594971 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38A5.5.1 6594553 6594971 -1

1 Sequence

Length
368

1 Sequence Ontology Term

Identifier Name Description
transcript