WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01B10.3.1 Sequence Name  C01B10.3.1
Length (nt)  1302   Chromosome Location  IV: 6619468-6621352
Chromosome . Primary Identifier  IV Chromosome Location . Start  6619468
Chromosome Location . End  6621352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015278 C01B10.3 C01B10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B10.3 C01B10.3 1209   IV: 6619560-6619664

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01B10.3.1 6619468 6621352 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127600   197   IV: 6619468-6619664 Caenorhabditis elegans
Exon127601   117   IV: 6619713-6619829 Caenorhabditis elegans
Exon127602   334   IV: 6619874-6620207 Caenorhabditis elegans
Exon127603   206   IV: 6620257-6620462 Caenorhabditis elegans
Exon127605   71   IV: 6620517-6620587 Caenorhabditis elegans
Exon127606   109   IV: 6620772-6620880 Caenorhabditis elegans
Exon127607   70   IV: 6620929-6620998 Caenorhabditis elegans
Exon127608   137   IV: 6621054-6621190 Caenorhabditis elegans
Exon127609   61   IV: 6621292-6621352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01B10.3.1 6619468 6621352 -1

1 Sequence

Length
1302

1 Sequence Ontology Term

Identifier Name Description
transcript