WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01B10.10.1 Sequence Name  C01B10.10.1
Length (nt)  1794   Chromosome Location  IV: 6624528-6627925
Chromosome . Primary Identifier  IV Chromosome Location . Start  6624528
Chromosome Location . End  6627925 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B10.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015284 cest-5.2 C01B10.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B10.10 C01B10.10 1752   IV: 6624564-6624836

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01B10.10.1 6624528 6627925 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127615   309   IV: 6624528-6624836 Caenorhabditis elegans
Exon127618   267   IV: 6625321-6625587 Caenorhabditis elegans
Exon127619   86   IV: 6625864-6625949 Caenorhabditis elegans
Exon127620   251   IV: 6625995-6626245 Caenorhabditis elegans
Exon127625   198   IV: 6626622-6626819 Caenorhabditis elegans
Exon127626   145   IV: 6626869-6627013 Caenorhabditis elegans
Exon127627   96   IV: 6627064-6627159 Caenorhabditis elegans
Exon127630   109   IV: 6627213-6627321 Caenorhabditis elegans
Exon127632   107   IV: 6627550-6627656 Caenorhabditis elegans
Exon127633   226   IV: 6627700-6627925 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01B10.10.1 6624528 6627925 -1

1 Sequence

Length
1794

1 Sequence Ontology Term

Identifier Name Description
transcript