WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01B10.8.1 Sequence Name  C01B10.8.1
Length (nt)  2110   Chromosome Location  IV: 6635089-6638155
Chromosome . Primary Identifier  IV Chromosome Location . Start  6635089
Chromosome Location . End  6638155 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B10.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015282 metl-13 C01B10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B10.8 C01B10.8 1971   IV: 6635092-6635177

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01B10.8.1 6635089 6638155 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127671   89   IV: 6635089-6635177 Caenorhabditis elegans
Exon127672   226   IV: 6635416-6635641 Caenorhabditis elegans
Exon127673   212   IV: 6635716-6635927 Caenorhabditis elegans
Exon127674   112   IV: 6635973-6636084 Caenorhabditis elegans
Exon127675   119   IV: 6636137-6636255 Caenorhabditis elegans
Exon127676   138   IV: 6636302-6636439 Caenorhabditis elegans
Exon127677   187   IV: 6636488-6636674 Caenorhabditis elegans
Exon127678   172   IV: 6636719-6636890 Caenorhabditis elegans
Exon127679   188   IV: 6637150-6637337 Caenorhabditis elegans
Exon127680   145   IV: 6637385-6637529 Caenorhabditis elegans
Exon127681   245   IV: 6637584-6637828 Caenorhabditis elegans
Exon127682   277   IV: 6637879-6638155 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01B10.8.1 6635089 6638155 1

1 Sequence

Length
2110

1 Sequence Ontology Term

Identifier Name Description
transcript