WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01B10.6b.1 Sequence Name  C01B10.6b.1
Length (nt)  1512   Chromosome Location  IV: 6640180-6645136
Chromosome . Primary Identifier  IV Chromosome Location . Start  6640180
Chromosome Location . End  6645136 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B10.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015280 C01B10.6 C01B10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B10.6b C01B10.6b 1512   IV: 6640180-6640237

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01B10.6b.1 6640180 6645136 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127692   58   IV: 6640180-6640237 Caenorhabditis elegans
Exon127696   60   IV: 6641522-6641581 Caenorhabditis elegans
Exon127699   99   IV: 6641875-6641973 Caenorhabditis elegans
Exon127702   121   IV: 6642335-6642455 Caenorhabditis elegans
Exon127705   136   IV: 6642502-6642637 Caenorhabditis elegans
Exon127708   90   IV: 6642774-6642863 Caenorhabditis elegans
Exon127711   46   IV: 6642920-6642965 Caenorhabditis elegans
Exon127714   77   IV: 6643021-6643097 Caenorhabditis elegans
Exon127717   134   IV: 6643144-6643277 Caenorhabditis elegans
Exon127720   110   IV: 6643766-6643875 Caenorhabditis elegans
Exon127723   114   IV: 6643921-6644034 Caenorhabditis elegans
Exon127726   82   IV: 6644326-6644407 Caenorhabditis elegans
Exon127729   95   IV: 6644455-6644549 Caenorhabditis elegans
Exon127732   213   IV: 6644704-6644916 Caenorhabditis elegans
Exon127735   42   IV: 6645011-6645052 Caenorhabditis elegans
Exon127738   35   IV: 6645102-6645136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01B10.6b.1 6640180 6645136 1

1 Sequence

Length
1512

1 Sequence Ontology Term

Identifier Name Description
transcript