WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01B10.6a.1 Sequence Name  C01B10.6a.1
Length (nt)  1566   Chromosome Location  IV: 6640180-6645181
Chromosome . Primary Identifier  IV Chromosome Location . Start  6640180
Chromosome Location . End  6645181 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B10.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015280 C01B10.6 C01B10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B10.6a C01B10.6a 1521   IV: 6640180-6640237

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01B10.6a.1 6640180 6645181 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127693   58   IV: 6640180-6640237 Caenorhabditis elegans
Exon127695   60   IV: 6641522-6641581 Caenorhabditis elegans
Exon127698   108   IV: 6641866-6641973 Caenorhabditis elegans
Exon127701   121   IV: 6642335-6642455 Caenorhabditis elegans
Exon127704   136   IV: 6642502-6642637 Caenorhabditis elegans
Exon127707   90   IV: 6642774-6642863 Caenorhabditis elegans
Exon127710   46   IV: 6642920-6642965 Caenorhabditis elegans
Exon127713   77   IV: 6643021-6643097 Caenorhabditis elegans
Exon127716   134   IV: 6643144-6643277 Caenorhabditis elegans
Exon127719   110   IV: 6643766-6643875 Caenorhabditis elegans
Exon127722   114   IV: 6643921-6644034 Caenorhabditis elegans
Exon127725   82   IV: 6644326-6644407 Caenorhabditis elegans
Exon127728   95   IV: 6644455-6644549 Caenorhabditis elegans
Exon127731   213   IV: 6644704-6644916 Caenorhabditis elegans
Exon127734   42   IV: 6645011-6645052 Caenorhabditis elegans
Exon127740   80   IV: 6645102-6645181 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01B10.6a.1 6640180 6645181 1

1 Sequence

Length
1566

1 Sequence Ontology Term

Identifier Name Description
transcript