WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6A.1a.1 Sequence Name  Y73B6A.1a.1
Length (nt)  1277   Chromosome Location  IV: 6661204-6667998
Chromosome . Primary Identifier  IV Chromosome Location . Start  6661204
Chromosome Location . End  6667998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022228 Y73B6A.1 Y73B6A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6A.1a Y73B6A.1a 1245   IV: 6661236-6661402

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6A.1a.1 6661204 6667998 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127779   199   IV: 6661204-6661402 Caenorhabditis elegans
Exon127781   310   IV: 6661647-6661956 Caenorhabditis elegans
Exon127784   359   IV: 6662332-6662690 Caenorhabditis elegans
Exon127785   108   IV: 6663068-6663175 Caenorhabditis elegans
Exon127786   238   IV: 6663291-6663528 Caenorhabditis elegans
Exon127788   63   IV: 6667936-6667998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6A.1a.1 6661204 6667998 -1

1 Sequence

Length
1277

1 Sequence Ontology Term

Identifier Name Description
transcript