WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73B6A.5b.1 Sequence Name  Y73B6A.5b.1
Length (nt)  3268   Chromosome Location  IV: 6742538-6748424
Chromosome . Primary Identifier  IV Chromosome Location . Start  6742538
Chromosome Location . End  6748424 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6A.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003030 lin-45 Y73B6A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6A.5b Y73B6A.5b 2568   IV: 6743238-6743465

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6A.5b.1 6742538 6748424 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127812   928   IV: 6742538-6743465 Caenorhabditis elegans
Exon127819   412   IV: 6743987-6744398 Caenorhabditis elegans
Exon127825   97   IV: 6744448-6744544 Caenorhabditis elegans
Exon127831   259   IV: 6744591-6744849 Caenorhabditis elegans
Exon127837   123   IV: 6745067-6745189 Caenorhabditis elegans
Exon127843   215   IV: 6745235-6745449 Caenorhabditis elegans
Exon127849   124   IV: 6745623-6745746 Caenorhabditis elegans
Exon127855   300   IV: 6745797-6746096 Caenorhabditis elegans
Exon127861   261   IV: 6746456-6746716 Caenorhabditis elegans
Exon127867   123   IV: 6746769-6746891 Caenorhabditis elegans
Exon127874   183   IV: 6746943-6747125 Caenorhabditis elegans
Exon127879   171   IV: 6747288-6747458 Caenorhabditis elegans
Exon127883   72   IV: 6748353-6748424 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73B6A.5b.1 6742538 6748424 -1

1 Sequence

Length
3268

1 Sequence Ontology Term

Identifier Name Description
transcript