WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H34C03.2b.1 Sequence Name  H34C03.2b.1
Length (nt)  3800   Chromosome Location  IV: 6757311-6762601
Chromosome . Primary Identifier  IV Chromosome Location . Start  6757311
Chromosome Location . End  6762601 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H34C03.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019259 usp-4 H34C03.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H34C03.2b H34C03.2b 2943   IV: 6757343-6757417

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H34C03.2b.1 6757311 6762601 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127890   107   IV: 6757311-6757417 Caenorhabditis elegans
Exon127893   178   IV: 6757465-6757642 Caenorhabditis elegans
Exon127895   191   IV: 6757689-6757879 Caenorhabditis elegans
Exon127897   64   IV: 6757926-6757989 Caenorhabditis elegans
Exon127899   140   IV: 6758037-6758176 Caenorhabditis elegans
Exon127901   92   IV: 6758223-6758314 Caenorhabditis elegans
Exon127902   240   IV: 6758457-6758696 Caenorhabditis elegans
Exon127905   238   IV: 6759546-6759783 Caenorhabditis elegans
Exon127907   540   IV: 6759830-6760369 Caenorhabditis elegans
Exon127909   149   IV: 6760417-6760565 Caenorhabditis elegans
Exon127911   780   IV: 6760619-6761398 Caenorhabditis elegans
Exon127913   143   IV: 6761475-6761617 Caenorhabditis elegans
Exon127914   938   IV: 6761664-6762601 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H34C03.2b.1 6757311 6762601 1

1 Sequence

Length
3800

1 Sequence Ontology Term

Identifier Name Description
transcript