WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H12.1b.2 Sequence Name  C17H12.1b.2
Length (nt)  2487   Chromosome Location  IV: 6779845-6784346
Chromosome . Primary Identifier  IV Chromosome Location . Start  6779845
Chromosome Location . End  6784346 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H12.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015927 dyci-1 C17H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H12.1b C17H12.1b 1920   IV: 6780405-6780459

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17H12.1b.2 6779845 6784346 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon127951   615   IV: 6779845-6780459 Caenorhabditis elegans
Exon127955   103   IV: 6780510-6780612 Caenorhabditis elegans
Exon127958   109   IV: 6780700-6780808 Caenorhabditis elegans
Exon127961   224   IV: 6781088-6781311 Caenorhabditis elegans
Exon127964   136   IV: 6781543-6781678 Caenorhabditis elegans
Exon127967   177   IV: 6781733-6781909 Caenorhabditis elegans
Exon127970   216   IV: 6782514-6782729 Caenorhabditis elegans
Exon127973   222   IV: 6782783-6783004 Caenorhabditis elegans
Exon127976   197   IV: 6783113-6783309 Caenorhabditis elegans
Exon127979   115   IV: 6783395-6783509 Caenorhabditis elegans
Exon127982   195   IV: 6783606-6783800 Caenorhabditis elegans
Exon127985   178   IV: 6784169-6784346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17H12.1b.2 6779845 6784346 -1

1 Sequence

Length
2487

1 Sequence Ontology Term

Identifier Name Description
transcript