WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17H12.12.1 Sequence Name  C17H12.12.1
Length (nt)  1924   Chromosome Location  IV: 6795924-6798789
Chromosome . Primary Identifier  IV Chromosome Location . Start  6795924
Chromosome Location . End  6798789 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17H12.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015937 C17H12.12 C17H12.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17H12.12 C17H12.12 1824   IV: 6795927-6795940

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17H12.12.1 6795924 6798789 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128019   17   IV: 6795924-6795940 Caenorhabditis elegans
Exon128020   90   IV: 6795989-6796078 Caenorhabditis elegans
Exon128021   88   IV: 6796121-6796208 Caenorhabditis elegans
Exon128022   147   IV: 6796256-6796402 Caenorhabditis elegans
Exon128023   93   IV: 6796449-6796541 Caenorhabditis elegans
Exon128024   218   IV: 6796674-6796891 Caenorhabditis elegans
Exon128025   115   IV: 6797225-6797339 Caenorhabditis elegans
Exon128026   862   IV: 6797391-6798252 Caenorhabditis elegans
Exon128027   168   IV: 6798366-6798533 Caenorhabditis elegans
Exon128028   126   IV: 6798664-6798789 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17H12.12.1 6795924 6798789 1

1 Sequence

Length
1924

1 Sequence Ontology Term

Identifier Name Description
transcript