WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H20E11.3.1 Sequence Name  H20E11.3.1
Length (nt)  1368   Chromosome Location  IV: 6824816-6826964
Chromosome . Primary Identifier  IV Chromosome Location . Start  6824816
Chromosome Location . End  6826964 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H20E11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019215 H20E11.3 H20E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H20E11.3 H20E11.3 1086   IV: 6824894-6824951

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H20E11.3.1 6824816 6826964 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128103   136   IV: 6824816-6824951 Caenorhabditis elegans
Exon128104   110   IV: 6824998-6825107 Caenorhabditis elegans
Exon128105   125   IV: 6825169-6825293 Caenorhabditis elegans
Exon128106   119   IV: 6825339-6825457 Caenorhabditis elegans
Exon128107   122   IV: 6825502-6825623 Caenorhabditis elegans
Exon128108   372   IV: 6826101-6826472 Caenorhabditis elegans
Exon128110   384   IV: 6826581-6826964 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H20E11.3.1 6824816 6826964 1

1 Sequence

Length
1368

1 Sequence Ontology Term

Identifier Name Description
transcript