WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H20E11.1a.1 Sequence Name  H20E11.1a.1
Length (nt)  1760   Chromosome Location  IV: 6830145-6833464
Chromosome . Primary Identifier  IV Chromosome Location . Start  6830145
Chromosome Location . End  6833464 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H20E11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019213 H20E11.1 H20E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H20E11.1a H20E11.1a 1446   IV: 6830234-6830306

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H20E11.1a.1 6830145 6833464 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128118   162   IV: 6830145-6830306 Caenorhabditis elegans
Exon128120   110   IV: 6830356-6830465 Caenorhabditis elegans
Exon128122   113   IV: 6830513-6830625 Caenorhabditis elegans
Exon128124   113   IV: 6830931-6831043 Caenorhabditis elegans
Exon128126   104   IV: 6831089-6831192 Caenorhabditis elegans
Exon128128   360   IV: 6831238-6831597 Caenorhabditis elegans
Exon128130   271   IV: 6832147-6832417 Caenorhabditis elegans
Exon128131   124   IV: 6832463-6832586 Caenorhabditis elegans
Exon128133   125   IV: 6833011-6833135 Caenorhabditis elegans
Exon128136   278   IV: 6833187-6833464 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H20E11.1a.1 6830145 6833464 1

1 Sequence

Length
1760

1 Sequence Ontology Term

Identifier Name Description
transcript