WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C05B10.1c Sequence Name  C05B10.1c
Length (nt)  1200   Chromosome Location  IV: 6842964-6845152
Chromosome . Primary Identifier  IV Chromosome Location . Start  6842964
Chromosome Location . End  6845152 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05B10.1c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003043 lip-1 C05B10.1 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05B10.1c 6842964 6845152 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128158   65   IV: 6842964-6843028 Caenorhabditis elegans
Exon128161   72   IV: 6843076-6843147 Caenorhabditis elegans
Exon128164   97   IV: 6843224-6843320 Caenorhabditis elegans
Exon128167   266   IV: 6843415-6843680 Caenorhabditis elegans
Exon128170   308   IV: 6844068-6844375 Caenorhabditis elegans
Exon128175   118   IV: 6844423-6844540 Caenorhabditis elegans
Exon128177   127   IV: 6844589-6844715 Caenorhabditis elegans
Exon128179   147   IV: 6845006-6845152 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05B10.1c 6842964 6845152 1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
transcript