WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22D1.4.1 Sequence Name  T22D1.4.1
Length (nt)  1963   Chromosome Location  IV: 6910683-6912865
Chromosome . Primary Identifier  IV Chromosome Location . Start  6910683
Chromosome Location . End  6912865 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22D1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020683 ribo-1 T22D1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22D1.4 T22D1.4 1761   IV: 6910683-6910847

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22D1.4.1 6910683 6912865 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128450   165   IV: 6910683-6910847 Caenorhabditis elegans
Exon128451   920   IV: 6910911-6911830 Caenorhabditis elegans
Exon128452   259   IV: 6911932-6912190 Caenorhabditis elegans
Exon128453   619   IV: 6912247-6912865 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22D1.4.1 6910683 6912865 1

1 Sequence

Length
1963

1 Sequence Ontology Term

Identifier Name Description
transcript