WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22D1.1.1 Sequence Name  T22D1.1.1
Length (nt)  1587   Chromosome Location  IV: 6923370-6925407
Chromosome . Primary Identifier  IV Chromosome Location . Start  6923370
Chromosome Location . End  6925407 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22D1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020680 T22D1.1 T22D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22D1.1 T22D1.1 1587   IV: 6923370-6923641

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22D1.1.1 6923370 6925407 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128500   272   IV: 6923370-6923641 Caenorhabditis elegans
Exon128501   129   IV: 6923685-6923813 Caenorhabditis elegans
Exon128502   103   IV: 6923857-6923959 Caenorhabditis elegans
Exon128503   116   IV: 6924188-6924303 Caenorhabditis elegans
Exon128504   365   IV: 6924347-6924711 Caenorhabditis elegans
Exon128505   148   IV: 6924755-6924902 Caenorhabditis elegans
Exon128507   454   IV: 6924954-6925407 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22D1.1.1 6923370 6925407 1

1 Sequence

Length
1587

1 Sequence Ontology Term

Identifier Name Description
transcript