WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK381.5a Sequence Name  ZK381.5a
Length (nt)  1572   Chromosome Location  IV: 6979028-6979141
Chromosome . Primary Identifier  IV Chromosome Location . Start  6979028
Chromosome Location . End  6979141
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK381.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41743 PRKL-1, isoform a 58.8 523 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00059394
WBRNAi00059395
WBRNAi00059396
WBRNAi00099899
WBRNAi00100521
WBRNAi00021990
WBRNAi00021991
WBRNAi00021992
WBRNAi00038280
WBRNAi00100895
WBRNAi00099697
WBRNAi00099293
WBRNAi00099495
WBRNAi00115811
WBRNAi00100147
WBRNAi00101837
WBRNAi00106258
WBRNAi00100334
WBRNAi00100708
WBRNAi00101082
WBRNAi00106259

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK381.5a 6979028 6979141 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022727 prkl-1 ZK381.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK381.5a 6979028 6979141 -1
CDS:ZK381.5a 6979210 6979371 -1
CDS:ZK381.5a 6979865 6980399 -1
CDS:ZK381.5a 6980446 6980555 -1
CDS:ZK381.5a 6982912 6982971 -1
CDS:ZK381.5a 6983322 6983459 -1
CDS:ZK381.5a 6986305 6986547 -1
CDS:ZK381.5a 6986726 6986935 -1

1 Sequence

Length
1572

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK381.5a.1 ZK381.5a.1 1858   IV: 6978742-6986935