WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A8.5.1 Sequence Name  C25A8.5.1
Length (nt)  1377   Chromosome Location  IV: 6999506-7001526
Chromosome . Primary Identifier  IV Chromosome Location . Start  6999506
Chromosome Location . End  7001526 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016085 C25A8.5 C25A8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A8.5 C25A8.5 1251   IV: 6999599-6999664

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A8.5.1 6999506 7001526 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128728   159   IV: 6999506-6999664 Caenorhabditis elegans
Exon128729   114   IV: 6999742-6999855 Caenorhabditis elegans
Exon128730   354   IV: 7000168-7000521 Caenorhabditis elegans
Exon128731   379   IV: 7000680-7001058 Caenorhabditis elegans
Exon128732   146   IV: 7001107-7001252 Caenorhabditis elegans
Exon128733   225   IV: 7001302-7001526 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A8.5.1 6999506 7001526 1

1 Sequence

Length
1377

1 Sequence Ontology Term

Identifier Name Description
transcript