WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06G3.5a.1 Sequence Name  C06G3.5a.1
Length (nt)  1351   Chromosome Location  IV: 7024211-7028144
Chromosome . Primary Identifier  IV Chromosome Location . Start  7024211
Chromosome Location . End  7028144 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015551 adah-1 C06G3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06G3.5a C06G3.5a 1176   IV: 7024243-7024325

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06G3.5a.1 7024211 7028144 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128776   115   IV: 7024211-7024325 Caenorhabditis elegans
Exon128778   132   IV: 7026472-7026603 Caenorhabditis elegans
Exon128781   247   IV: 7026779-7027025 Caenorhabditis elegans
Exon128784   142   IV: 7027162-7027303 Caenorhabditis elegans
Exon128787   479   IV: 7027353-7027831 Caenorhabditis elegans
Exon128791   236   IV: 7027909-7028144 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06G3.5a.1 7024211 7028144 1

1 Sequence

Length
1351

1 Sequence Ontology Term

Identifier Name Description
transcript