WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06G3.9.1 Sequence Name  C06G3.9.1
Length (nt)  2354   Chromosome Location  IV: 7032696-7036859
Chromosome . Primary Identifier  IV Chromosome Location . Start  7032696
Chromosome Location . End  7036859 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015555 ufl-1 C06G3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06G3.9 C06G3.9 2208   IV: 7032842-7032970

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06G3.9.1 7032696 7036859 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128807   275   IV: 7032696-7032970 Caenorhabditis elegans
Exon128808   181   IV: 7033020-7033200 Caenorhabditis elegans
Exon128809   295   IV: 7033482-7033776 Caenorhabditis elegans
Exon128810   160   IV: 7033828-7033987 Caenorhabditis elegans
Exon128811   216   IV: 7034034-7034249 Caenorhabditis elegans
Exon128812   284   IV: 7034291-7034574 Caenorhabditis elegans
Exon128813   147   IV: 7034631-7034777 Caenorhabditis elegans
Exon128814   209   IV: 7034823-7035031 Caenorhabditis elegans
Exon128815   240   IV: 7035081-7035320 Caenorhabditis elegans
Exon128816   155   IV: 7035476-7035630 Caenorhabditis elegans
Exon128819   118   IV: 7036473-7036590 Caenorhabditis elegans
Exon128820   74   IV: 7036786-7036859 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06G3.9.1 7032696 7036859 -1

1 Sequence

Length
2354

1 Sequence Ontology Term

Identifier Name Description
transcript