WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06G3.2.1 Sequence Name  C06G3.2.1
Length (nt)  3197   Chromosome Location  IV: 7040211-7043694
Chromosome . Primary Identifier  IV Chromosome Location . Start  7040211
Chromosome Location . End  7043694 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002228 klp-18 C06G3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06G3.2 C06G3.2 2799   IV: 7040212-7040462

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06G3.2.1 7040211 7043694 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128830   252   IV: 7040211-7040462 Caenorhabditis elegans
Exon128831   1090   IV: 7040509-7041598 Caenorhabditis elegans
Exon128832   365   IV: 7041646-7042010 Caenorhabditis elegans
Exon128833   188   IV: 7042062-7042249 Caenorhabditis elegans
Exon128834   335   IV: 7042299-7042633 Caenorhabditis elegans
Exon128835   420   IV: 7042683-7043102 Caenorhabditis elegans
Exon128836   547   IV: 7043148-7043694 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06G3.2.1 7040211 7043694 1

1 Sequence

Length
3197

1 Sequence Ontology Term

Identifier Name Description
transcript