WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C06G3.1b Sequence Name  C06G3.1b
Length (nt)  1242   Chromosome Location  IV: 7050163-7050223
Chromosome . Primary Identifier  IV Chromosome Location . Start  7050163
Chromosome Location . End  7050223
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G3.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37188 NHR-105, isoform b 47.1 413 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00039928
WBRNAi00010336
WBRNAi00028591
WBRNAi00112736
WBRNAi00112735
WBRNAi00112737

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C06G3.1b 7050163 7050223 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003695 nhr-105 C06G3.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C06G3.1b 7050163 7050223 1
CDS:C06G3.1b 7050936 7051130 1
CDS:C06G3.1b 7051182 7051253 1
CDS:C06G3.1b 7051549 7051649 1
CDS:C06G3.1b 7051776 7051871 1
CDS:C06G3.1b 7051953 7052078 1
CDS:C06G3.1b 7052126 7052214 1
CDS:C06G3.1b 7052262 7052467 1
CDS:C06G3.1b 7053019 7053176 1
CDS:C06G3.1b 7053228 7053365 1

1 Sequence

Length
1242

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06G3.1b.1 C06G3.1b.1 1334   IV: 7050156-7053450