WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43B11AL.2b.1 Sequence Name  Y43B11AL.2b.1
Length (nt)  942   Chromosome Location  IV: 7057977-7059845
Chromosome . Primary Identifier  IV Chromosome Location . Start  7057977
Chromosome Location . End  7059845 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43B11AL.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005941 srx-50 Y43B11AL.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43B11AL.2b Y43B11AL.2b 942   IV: 7057977-7058018

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43B11AL.2b.1 7057977 7059845 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128920   42   IV: 7057977-7058018 Caenorhabditis elegans
Exon128923   161   IV: 7058586-7058746 Caenorhabditis elegans
Exon128925   147   IV: 7058827-7058973 Caenorhabditis elegans
Exon128927   77   IV: 7059025-7059101 Caenorhabditis elegans
Exon128929   173   IV: 7059154-7059326 Caenorhabditis elegans
Exon128931   203   IV: 7059409-7059611 Caenorhabditis elegans
Exon128933   62   IV: 7059660-7059721 Caenorhabditis elegans
Exon128934   77   IV: 7059769-7059845 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43B11AL.2b.1 7057977 7059845 1

1 Sequence

Length
942

1 Sequence Ontology Term

Identifier Name Description
transcript