WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43B11AR.3.1 Sequence Name  Y43B11AR.3.1
Length (nt)  1176   Chromosome Location  IV: 7082217-7083716
Chromosome . Primary Identifier  IV Chromosome Location . Start  7082217
Chromosome Location . End  7083716 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43B11AR.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021544 Y43B11AR.3 Y43B11AR.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43B11AR.3 Y43B11AR.3 1008   IV: 7082276-7082441

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43B11AR.3.1 7082217 7083716 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon128916   225   IV: 7082217-7082441 Caenorhabditis elegans
Exon128917   153   IV: 7082500-7082652 Caenorhabditis elegans
Exon128918   152   IV: 7082696-7082847 Caenorhabditis elegans
Exon128919   206   IV: 7082896-7083101 Caenorhabditis elegans
Exon128920   95   IV: 7083146-7083240 Caenorhabditis elegans
Exon128921   345   IV: 7083372-7083716 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43B11AR.3.1 7082217 7083716 -1

1 Sequence

Length
1176

1 Sequence Ontology Term

Identifier Name Description
transcript