WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC477.9b Sequence Name  ZC477.9b
Length (nt)  1110   Chromosome Location  IV: 7085688-7085857
Chromosome . Primary Identifier  IV Chromosome Location . Start  7085688
Chromosome Location . End  7085857
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC477.9b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31397 DEB-1, isoform b 41.2 369 Caenorhabditis elegans
 

Other

27 RNAi

WormBase ID
WBRNAi00099871
WBRNAi00100517
WBRNAi00027597
WBRNAi00109637
WBRNAi00109249
WBRNAi00100891
WBRNAi00099265
WBRNAi00099669
WBRNAi00099467
WBRNAi00080643
WBRNAi00100143
WBRNAi00113651
WBRNAi00109346
WBRNAi00100330
WBRNAi00113650
WBRNAi00100704
WBRNAi00101078
WBRNAi00091679
WBRNAi00091694
WBRNAi00091709
WBRNAi00091724
WBRNAi00091739
WBRNAi00091754
WBRNAi00091775
WBRNAi00109540
WBRNAi00113652
WBRNAi00109443

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC477.9b 7085688 7085857 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000942 deb-1 ZC477.9 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC477.9b 7085688 7085857 -1
CDS:ZC477.9b 7086067 7086099 -1
CDS:ZC477.9b 7086183 7086273 -1
CDS:ZC477.9b 7086327 7086428 -1
CDS:ZC477.9b 7086477 7086851 -1
CDS:ZC477.9b 7087469 7087671 -1
CDS:ZC477.9b 7087762 7087897 -1

1 Sequence

Length
1110

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC477.9b.1 ZC477.9b.1 1590   IV: 7085218-7087907