WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC477.5.1 Sequence Name  ZC477.5.1
Length (nt)  1114   Chromosome Location  IV: 7101379-7103261
Chromosome . Primary Identifier  IV Chromosome Location . Start  7101379
Chromosome Location . End  7103261 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC477.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022620 rde-8 ZC477.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC477.5 ZC477.5 1020   IV: 7101463-7101583

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC477.5.1 7101379 7103261 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129022   205   IV: 7101379-7101583 Caenorhabditis elegans
Exon129023   83   IV: 7102116-7102198 Caenorhabditis elegans
Exon129024   98   IV: 7102243-7102340 Caenorhabditis elegans
Exon129025   429   IV: 7102388-7102816 Caenorhabditis elegans
Exon129026   106   IV: 7102865-7102970 Caenorhabditis elegans
Exon129027   100   IV: 7103023-7103122 Caenorhabditis elegans
Exon129028   93   IV: 7103169-7103261 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC477.5.1 7101379 7103261 -1

1 Sequence

Length
1114

1 Sequence Ontology Term

Identifier Name Description
transcript