WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC477.2.1 Sequence Name  ZC477.2.1
Length (nt)  1202   Chromosome Location  IV: 7108193-7109940
Chromosome . Primary Identifier  IV Chromosome Location . Start  7108193
Chromosome Location . End  7109940 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC477.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022617 ZC477.2 ZC477.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC477.2 ZC477.2 1125   IV: 7108221-7108301

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC477.2.1 7108193 7109940 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129055   109   IV: 7108193-7108301 Caenorhabditis elegans
Exon129056   66   IV: 7108350-7108415 Caenorhabditis elegans
Exon129057   221   IV: 7108469-7108689 Caenorhabditis elegans
Exon129058   76   IV: 7108734-7108809 Caenorhabditis elegans
Exon129059   75   IV: 7108919-7108993 Caenorhabditis elegans
Exon129060   162   IV: 7109038-7109199 Caenorhabditis elegans
Exon129061   98   IV: 7109314-7109411 Caenorhabditis elegans
Exon129062   115   IV: 7109458-7109572 Caenorhabditis elegans
Exon129063   81   IV: 7109618-7109698 Caenorhabditis elegans
Exon129064   199   IV: 7109742-7109940 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC477.2.1 7108193 7109940 1

1 Sequence

Length
1202

1 Sequence Ontology Term

Identifier Name Description
transcript