WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.9.1 Sequence Name  C34D4.9.1
Length (nt)  1576   Chromosome Location  IV: 7114899-7119926
Chromosome . Primary Identifier  IV Chromosome Location . Start  7114899
Chromosome Location . End  7119926 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003527 nas-8 C34D4.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.9 C34D4.9 1212   IV: 7115650-7115743

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.9.1 7114899 7119926 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129075   180   IV: 7114899-7115078 Caenorhabditis elegans
Exon129077   140   IV: 7115604-7115743 Caenorhabditis elegans
Exon129078   72   IV: 7116056-7116127 Caenorhabditis elegans
Exon129080   137   IV: 7116978-7117114 Caenorhabditis elegans
Exon129082   138   IV: 7117834-7117971 Caenorhabditis elegans
Exon129084   83   IV: 7118022-7118104 Caenorhabditis elegans
Exon129086   67   IV: 7118149-7118215 Caenorhabditis elegans
Exon129088   109   IV: 7118324-7118432 Caenorhabditis elegans
Exon129090   78   IV: 7118688-7118765 Caenorhabditis elegans
Exon129092   104   IV: 7118821-7118924 Caenorhabditis elegans
Exon129094   127   IV: 7118979-7119105 Caenorhabditis elegans
Exon129097   341   IV: 7119586-7119926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.9.1 7114899 7119926 1

1 Sequence

Length
1576

1 Sequence Ontology Term

Identifier Name Description
transcript