WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.10.1 Sequence Name  C34D4.10.1
Length (nt)  1178   Chromosome Location  IV: 7119916-7121413
Chromosome . Primary Identifier  IV Chromosome Location . Start  7119916
Chromosome Location . End  7121413 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016402 C34D4.10 C34D4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.10 C34D4.10 1089   IV: 7120005-7120094

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.10.1 7119916 7121413 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129098   179   IV: 7119916-7120094 Caenorhabditis elegans
Exon129099   126   IV: 7120142-7120267 Caenorhabditis elegans
Exon129100   215   IV: 7120313-7120527 Caenorhabditis elegans
Exon129101   177   IV: 7120574-7120750 Caenorhabditis elegans
Exon129102   191   IV: 7120800-7120990 Caenorhabditis elegans
Exon129103   155   IV: 7121043-7121197 Caenorhabditis elegans
Exon129104   135   IV: 7121279-7121413 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.10.1 7119916 7121413 -1

1 Sequence

Length
1178

1 Sequence Ontology Term

Identifier Name Description
transcript