WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.9.2 Sequence Name  C34D4.9.2
Length (nt)  1386   Chromosome Location  IV: 7115602-7119914
Chromosome . Primary Identifier  IV Chromosome Location . Start  7115602
Chromosome Location . End  7119914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.9.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003527 nas-8 C34D4.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.9 C34D4.9 1212   IV: 7115650-7115743

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.9.2 7115602 7119914 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129131   142   IV: 7115602-7115743 Caenorhabditis elegans
Exon129134   72   IV: 7116056-7116127 Caenorhabditis elegans
Exon129136   137   IV: 7116978-7117114 Caenorhabditis elegans
Exon129138   138   IV: 7117834-7117971 Caenorhabditis elegans
Exon129140   83   IV: 7118022-7118104 Caenorhabditis elegans
Exon129142   67   IV: 7118149-7118215 Caenorhabditis elegans
Exon129144   109   IV: 7118324-7118432 Caenorhabditis elegans
Exon129146   78   IV: 7118688-7118765 Caenorhabditis elegans
Exon129148   104   IV: 7118821-7118924 Caenorhabditis elegans
Exon129150   127   IV: 7118979-7119105 Caenorhabditis elegans
Exon129151   329   IV: 7119586-7119914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.9.2 7115602 7119914 1

1 Sequence

Length
1386

1 Sequence Ontology Term

Identifier Name Description
transcript