WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.14e.1 Sequence Name  C34D4.14e.1
Length (nt)  8564   Chromosome Location  IV: 7134346-7144719
Chromosome . Primary Identifier  IV Chromosome Location . Start  7134346
Chromosome Location . End  7144719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.14e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016405 hecd-1 C34D4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.14e C34D4.14e 7941   IV: 7134857-7134964

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14e.1 7134346 7144719 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129137   619   IV: 7134346-7134964 Caenorhabditis elegans
Exon129150   74   IV: 7135020-7135093 Caenorhabditis elegans
Exon129160   268   IV: 7135140-7135407 Caenorhabditis elegans
Exon129170   145   IV: 7135462-7135606 Caenorhabditis elegans
Exon129180   423   IV: 7135653-7136075 Caenorhabditis elegans
Exon129190   431   IV: 7136133-7136563 Caenorhabditis elegans
Exon129200   944   IV: 7136613-7137556 Caenorhabditis elegans
Exon129210   864   IV: 7137639-7138502 Caenorhabditis elegans
Exon129220   112   IV: 7138909-7139020 Caenorhabditis elegans
Exon129230   168   IV: 7139088-7139255 Caenorhabditis elegans
Exon129240   1443   IV: 7139311-7140753 Caenorhabditis elegans
Exon129250   267   IV: 7140801-7141067 Caenorhabditis elegans
Exon129260   114   IV: 7141112-7141225 Caenorhabditis elegans
Exon129272   126   IV: 7141353-7141478 Caenorhabditis elegans
Exon129280   384   IV: 7141656-7142039 Caenorhabditis elegans
Exon129290   659   IV: 7142118-7142776 Caenorhabditis elegans
Exon129302   151   IV: 7142822-7142972 Caenorhabditis elegans
Exon129308   165   IV: 7143145-7143309 Caenorhabditis elegans
Exon129320   492   IV: 7143355-7143846 Caenorhabditis elegans
Exon129330   245   IV: 7143916-7144160 Caenorhabditis elegans
Exon129339   362   IV: 7144207-7144568 Caenorhabditis elegans
Exon129349   108   IV: 7144612-7144719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14e.1 7134346 7144719 -1

1 Sequence

Length
8564

1 Sequence Ontology Term

Identifier Name Description
transcript