WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.14a.2 Sequence Name  C34D4.14a.2
Length (nt)  8466   Chromosome Location  IV: 7134345-7144571
Chromosome . Primary Identifier  IV Chromosome Location . Start  7134345
Chromosome Location . End  7144571 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.14a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016405 hecd-1 C34D4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.14a C34D4.14a 7947   IV: 7134857-7134964

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14a.2 7134345 7144571 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129190   620   IV: 7134345-7134964 Caenorhabditis elegans
Exon129201   74   IV: 7135020-7135093 Caenorhabditis elegans
Exon129211   268   IV: 7135140-7135407 Caenorhabditis elegans
Exon129221   145   IV: 7135462-7135606 Caenorhabditis elegans
Exon129231   423   IV: 7135653-7136075 Caenorhabditis elegans
Exon129241   431   IV: 7136133-7136563 Caenorhabditis elegans
Exon129251   944   IV: 7136613-7137556 Caenorhabditis elegans
Exon129261   864   IV: 7137639-7138502 Caenorhabditis elegans
Exon129271   112   IV: 7138909-7139020 Caenorhabditis elegans
Exon129281   168   IV: 7139088-7139255 Caenorhabditis elegans
Exon129291   1443   IV: 7139311-7140753 Caenorhabditis elegans
Exon129301   261   IV: 7140801-7141061 Caenorhabditis elegans
Exon129311   114   IV: 7141112-7141225 Caenorhabditis elegans
Exon129321   138   IV: 7141341-7141478 Caenorhabditis elegans
Exon129331   384   IV: 7141656-7142039 Caenorhabditis elegans
Exon129341   659   IV: 7142118-7142776 Caenorhabditis elegans
Exon129355   151   IV: 7142822-7142972 Caenorhabditis elegans
Exon129361   165   IV: 7143145-7143309 Caenorhabditis elegans
Exon129371   492   IV: 7143355-7143846 Caenorhabditis elegans
Exon129381   245   IV: 7143916-7144160 Caenorhabditis elegans
Exon129399   365   IV: 7144207-7144571 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14a.2 7134345 7144571 -1

1 Sequence

Length
8466

1 Sequence Ontology Term

Identifier Name Description
transcript