WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.14c.1 Sequence Name  C34D4.14c.1
Length (nt)  8442   Chromosome Location  IV: 7134347-7144715
Chromosome . Primary Identifier  IV Chromosome Location . Start  7134347
Chromosome Location . End  7144715 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.14c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016405 hecd-1 C34D4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.14c C34D4.14c 7824   IV: 7134857-7134964

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14c.1 7134347 7144715 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129195   618   IV: 7134347-7134964 Caenorhabditis elegans
Exon129203   74   IV: 7135020-7135093 Caenorhabditis elegans
Exon129213   268   IV: 7135140-7135407 Caenorhabditis elegans
Exon129223   145   IV: 7135462-7135606 Caenorhabditis elegans
Exon129233   423   IV: 7135653-7136075 Caenorhabditis elegans
Exon129243   431   IV: 7136133-7136563 Caenorhabditis elegans
Exon129253   944   IV: 7136613-7137556 Caenorhabditis elegans
Exon129263   864   IV: 7137639-7138502 Caenorhabditis elegans
Exon129273   112   IV: 7138909-7139020 Caenorhabditis elegans
Exon129283   168   IV: 7139088-7139255 Caenorhabditis elegans
Exon129293   1443   IV: 7139311-7140753 Caenorhabditis elegans
Exon129303   261   IV: 7140801-7141061 Caenorhabditis elegans
Exon129313   114   IV: 7141112-7141225 Caenorhabditis elegans
Exon129325   126   IV: 7141353-7141478 Caenorhabditis elegans
Exon129333   384   IV: 7141656-7142039 Caenorhabditis elegans
Exon129343   659   IV: 7142118-7142776 Caenorhabditis elegans
Exon129351   130   IV: 7142822-7142951 Caenorhabditis elegans
Exon129367   75   IV: 7143235-7143309 Caenorhabditis elegans
Exon129373   492   IV: 7143355-7143846 Caenorhabditis elegans
Exon129383   245   IV: 7143916-7144160 Caenorhabditis elegans
Exon129392   362   IV: 7144207-7144568 Caenorhabditis elegans
Exon129403   104   IV: 7144612-7144715 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14c.1 7134347 7144715 -1

1 Sequence

Length
8442

1 Sequence Ontology Term

Identifier Name Description
transcript