WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.14h.1 Sequence Name  C34D4.14h.1
Length (nt)  8452   Chromosome Location  IV: 7134347-7144719
Chromosome . Primary Identifier  IV Chromosome Location . Start  7134347
Chromosome Location . End  7144719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.14h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016405 hecd-1 C34D4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.14h C34D4.14h 7830   IV: 7134857-7134964

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14h.1 7134347 7144719 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129196   618   IV: 7134347-7134964 Caenorhabditis elegans
Exon129209   74   IV: 7135020-7135093 Caenorhabditis elegans
Exon129219   268   IV: 7135140-7135407 Caenorhabditis elegans
Exon129229   145   IV: 7135462-7135606 Caenorhabditis elegans
Exon129239   423   IV: 7135653-7136075 Caenorhabditis elegans
Exon129249   431   IV: 7136133-7136563 Caenorhabditis elegans
Exon129259   944   IV: 7136613-7137556 Caenorhabditis elegans
Exon129269   864   IV: 7137639-7138502 Caenorhabditis elegans
Exon129279   112   IV: 7138909-7139020 Caenorhabditis elegans
Exon129289   168   IV: 7139088-7139255 Caenorhabditis elegans
Exon129299   1443   IV: 7139311-7140753 Caenorhabditis elegans
Exon129309   267   IV: 7140801-7141067 Caenorhabditis elegans
Exon129319   114   IV: 7141112-7141225 Caenorhabditis elegans
Exon129329   126   IV: 7141353-7141478 Caenorhabditis elegans
Exon129339   384   IV: 7141656-7142039 Caenorhabditis elegans
Exon129349   659   IV: 7142118-7142776 Caenorhabditis elegans
Exon129353   130   IV: 7142822-7142951 Caenorhabditis elegans
Exon129369   75   IV: 7143235-7143309 Caenorhabditis elegans
Exon129379   492   IV: 7143355-7143846 Caenorhabditis elegans
Exon129389   245   IV: 7143916-7144160 Caenorhabditis elegans
Exon129397   362   IV: 7144207-7144568 Caenorhabditis elegans
Exon129406   108   IV: 7144612-7144719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14h.1 7134347 7144719 -1

1 Sequence

Length
8452

1 Sequence Ontology Term

Identifier Name Description
transcript