WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.14a.1 Sequence Name  C34D4.14a.1
Length (nt)  8561   Chromosome Location  IV: 7134349-7144713
Chromosome . Primary Identifier  IV Chromosome Location . Start  7134349
Chromosome Location . End  7144713 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.14a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016405 hecd-1 C34D4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.14a C34D4.14a 7947   IV: 7134857-7134964

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14a.1 7134349 7144713 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129197   616   IV: 7134349-7134964 Caenorhabditis elegans
Exon129200   74   IV: 7135020-7135093 Caenorhabditis elegans
Exon129210   268   IV: 7135140-7135407 Caenorhabditis elegans
Exon129220   145   IV: 7135462-7135606 Caenorhabditis elegans
Exon129230   423   IV: 7135653-7136075 Caenorhabditis elegans
Exon129240   431   IV: 7136133-7136563 Caenorhabditis elegans
Exon129250   944   IV: 7136613-7137556 Caenorhabditis elegans
Exon129260   864   IV: 7137639-7138502 Caenorhabditis elegans
Exon129270   112   IV: 7138909-7139020 Caenorhabditis elegans
Exon129280   168   IV: 7139088-7139255 Caenorhabditis elegans
Exon129290   1443   IV: 7139311-7140753 Caenorhabditis elegans
Exon129300   261   IV: 7140801-7141061 Caenorhabditis elegans
Exon129310   114   IV: 7141112-7141225 Caenorhabditis elegans
Exon129320   138   IV: 7141341-7141478 Caenorhabditis elegans
Exon129330   384   IV: 7141656-7142039 Caenorhabditis elegans
Exon129340   659   IV: 7142118-7142776 Caenorhabditis elegans
Exon129354   151   IV: 7142822-7142972 Caenorhabditis elegans
Exon129360   165   IV: 7143145-7143309 Caenorhabditis elegans
Exon129370   492   IV: 7143355-7143846 Caenorhabditis elegans
Exon129380   245   IV: 7143916-7144160 Caenorhabditis elegans
Exon129390   362   IV: 7144207-7144568 Caenorhabditis elegans
Exon129400   102   IV: 7144612-7144713 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14a.1 7134349 7144713 -1

1 Sequence

Length
8561

1 Sequence Ontology Term

Identifier Name Description
transcript