WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.14b.1 Sequence Name  C34D4.14b.1
Length (nt)  8450   Chromosome Location  IV: 7134349-7144713
Chromosome . Primary Identifier  IV Chromosome Location . Start  7134349
Chromosome Location . End  7144713 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.14b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016405 hecd-1 C34D4.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.14b C34D4.14b 7836   IV: 7134857-7134964

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14b.1 7134349 7144713 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129198   616   IV: 7134349-7134964 Caenorhabditis elegans
Exon129202   74   IV: 7135020-7135093 Caenorhabditis elegans
Exon129212   268   IV: 7135140-7135407 Caenorhabditis elegans
Exon129222   145   IV: 7135462-7135606 Caenorhabditis elegans
Exon129232   423   IV: 7135653-7136075 Caenorhabditis elegans
Exon129242   431   IV: 7136133-7136563 Caenorhabditis elegans
Exon129252   944   IV: 7136613-7137556 Caenorhabditis elegans
Exon129262   864   IV: 7137639-7138502 Caenorhabditis elegans
Exon129272   112   IV: 7138909-7139020 Caenorhabditis elegans
Exon129282   168   IV: 7139088-7139255 Caenorhabditis elegans
Exon129292   1443   IV: 7139311-7140753 Caenorhabditis elegans
Exon129302   261   IV: 7140801-7141061 Caenorhabditis elegans
Exon129312   114   IV: 7141112-7141225 Caenorhabditis elegans
Exon129322   138   IV: 7141341-7141478 Caenorhabditis elegans
Exon129332   384   IV: 7141656-7142039 Caenorhabditis elegans
Exon129342   659   IV: 7142118-7142776 Caenorhabditis elegans
Exon129350   130   IV: 7142822-7142951 Caenorhabditis elegans
Exon129366   75   IV: 7143235-7143309 Caenorhabditis elegans
Exon129372   492   IV: 7143355-7143846 Caenorhabditis elegans
Exon129382   245   IV: 7143916-7144160 Caenorhabditis elegans
Exon129391   362   IV: 7144207-7144568 Caenorhabditis elegans
Exon129401   102   IV: 7144612-7144713 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.14b.1 7134349 7144713 -1

1 Sequence

Length
8450

1 Sequence Ontology Term

Identifier Name Description
transcript